Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav6n-6A0A075B6B2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm14494-201ENSMUST00000118786 435 ntBASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav6n-6A0A075B6B2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm5177-201ENSMUST00000183092 997 ntBASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Gm27525-201ENSMUST00000184465 107 ntBASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav6n-6A0A075B6B2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms