Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb3S4R1G7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Mir1895-201ENSMUST00000122615 79 ntBASIC12.5□□□□□ -0.41
H2afb3S4R1G7 AA543401-201ENSMUST00000164248 1269 ntBASIC12.5□□□□□ -0.41
H2afb3S4R1G7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Gm27494-201ENSMUST00000184735 189 ntBASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Gm5264-201ENSMUST00000190584 848 ntBASIC12.5□□□□□ -0.41
H2afb3S4R1G7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Gm10175-201ENSMUST00000086013 645 ntBASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb3S4R1G7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Gm6222-201ENSMUST00000120787 396 ntBASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Gm11745-201ENSMUST00000121669 448 ntBASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Gm8000-201ENSMUST00000188378 592 ntBASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Gm6443-201ENSMUST00000203599 874 ntBASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Gm18049-201ENSMUST00000208909 581 ntBASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb3S4R1G7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb3S4R1G7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms