Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Gm13597-201ENSMUST00000121239 375 ntBASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Gm18041-201ENSMUST00000218210 618 ntBASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Crlf3Q9Z2L7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Crlf3Q9Z2L7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Gm23935-201ENSMUST00000102303 57 ntBASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Gm24270-201ENSMUST00000102326 57 ntBASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Gm24245-201ENSMUST00000157318 57 ntBASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Crlf3Q9Z2L7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms