Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Gm7287-201ENSMUST00000205267 602 ntBASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smarcb1Q9Z0H3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Smarcb1Q9Z0H3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm15770-201ENSMUST00000117498 584 ntBASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm11814-201ENSMUST00000119515 929 ntBASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm27486-201ENSMUST00000184923 80 ntBASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm42550-201ENSMUST00000201553 960 ntBASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm17330-201ENSMUST00000221047 165 ntBASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Smarcb1Q9Z0H3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms