Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trem1Q9JKE2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trem1Q9JKE2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Gm15358-201ENSMUST00000119249 520 ntBASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Gm12497-201ENSMUST00000138778 237 ntBASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Gm25016-201ENSMUST00000158399 131 ntBASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Gm27742-201ENSMUST00000184667 60 ntBASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trem1Q9JKE2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms