Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Gm27389-201ENSMUST00000183622 195 ntBASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Grk6-207ENSMUST00000225925 2769 ntBASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smco4Q9JIS3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smco4Q9JIS3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Gm12527-201ENSMUST00000117967 564 ntBASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Gm2451-201ENSMUST00000199447 999 ntBASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Gm10290-201ENSMUST00000200451 999 ntBASIC11.08□□□□□ -0.64
Smco4Q9JIS3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.08□□□□□ -0.64
Smco4Q9JIS3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms