Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
5530400C23RikQ9D3I0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
5530400C23RikQ9D3I0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
5530400C23RikQ9D3I0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
5530400C23RikQ9D3I0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.65□□□□□ -0.22
5530400C23RikQ9D3I0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
5530400C23RikQ9D3I0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
5530400C23RikQ9D3I0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
5530400C23RikQ9D3I0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Gm27680-201ENSMUST00000184192 160 ntBASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
5530400C23RikQ9D3I0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Gm15920-201ENSMUST00000118998 402 ntBASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
5530400C23RikQ9D3I0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Gm15393-201ENSMUST00000120499 219 ntBASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Gm3436-201ENSMUST00000179930 840 ntBASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Gm27321-201ENSMUST00000185021 205 ntBASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Gm21470-201ENSMUST00000187680 696 ntBASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Gm43703-201ENSMUST00000200523 763 ntBASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Gm9063-201ENSMUST00000223299 582 ntBASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
5530400C23RikQ9D3I0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms