Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ift27Q9D0P8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Gm7284-201ENSMUST00000131667 944 ntBASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.65□□□□□ -0.38
Ift27Q9D0P8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ift27Q9D0P8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ift27Q9D0P8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44357-201ENSMUST00000195897 142 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm19658-201ENSMUST00000196231 138 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44367-201ENSMUST00000196836 138 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44350-201ENSMUST00000197197 138 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44390-201ENSMUST00000197533 144 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44313-201ENSMUST00000198018 138 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44486-201ENSMUST00000198508 138 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44314-201ENSMUST00000199263 138 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44394-201ENSMUST00000199558 138 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44484-201ENSMUST00000199873 138 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44466-201ENSMUST00000200264 138 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm44359-201ENSMUST00000200671 138 ntBASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.64□□□□□ -0.39
Ift27Q9D0P8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ift27Q9D0P8 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Ift27Q9D0P8 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.63□□□□□ -0.39
Ift27Q9D0P8 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.63□□□□□ -0.39
Ift27Q9D0P8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms