Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cldnd1Q9CQX5 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cldnd1Q9CQX5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Gm15370-201ENSMUST00000117158 253 ntBASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cldnd1Q9CQX5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Gm22323-201ENSMUST00000103832 109 ntBASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Gm16379-201ENSMUST00000161469 348 ntBASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Gm17376-201ENSMUST00000166016 84 ntBASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Gm7029-201ENSMUST00000173226 450 ntBASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.1□□□□□ -0.15
Cldnd1Q9CQX5 Gm8762-201ENSMUST00000193486 339 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms