Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trim8Q99PJ2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.6□□□□□ -0.23
Trim8Q99PJ2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Gm15427-201ENSMUST00000117288 531 ntBASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.6□□□□□ -0.23
Trim8Q99PJ2 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Trim8Q99PJ2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim8Q99PJ2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms