Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh15Q99PJ1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Gm3096-201ENSMUST00000185770 364 ntBASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Gm8099-201ENSMUST00000200510 742 ntBASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Gm44100-201ENSMUST00000204329 436 ntBASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdh15Q99PJ1 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdh15Q99PJ1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Mir1943-201ENSMUST00000158276 73 ntBASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Gm43378-201ENSMUST00000199336 582 ntBASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Gm8285-201ENSMUST00000208293 759 ntBASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdh15Q99PJ1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Gm12502-201ENSMUST00000120197 444 ntBASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Gm37835-201ENSMUST00000193305 361 ntBASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdh15Q99PJ1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms