Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm21910-201ENSMUST00000191163 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21849-201ENSMUST00000191571 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm28678-201ENSMUST00000191593 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm20910-201ENSMUST00000193268 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm21871-201ENSMUST00000194621 696 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp1b1Q99LU0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Chmp1b1Q99LU0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Chmp1b1Q99LU0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Gm5779-201ENSMUST00000218467 910 ntBASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Matn2-206ENSMUST00000228570 2798 ntBASIC13.14□□□□□ -0.31
Chmp1b1Q99LU0 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm22065-201ENSMUST00000103753 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm22066-201ENSMUST00000103761 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm24932-201ENSMUST00000103763 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm24115-201ENSMUST00000103799 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm22190-201ENSMUST00000103827 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm22191-201ENSMUST00000103831 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm24721-201ENSMUST00000103849 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm28018-201ENSMUST00000103869 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm26399-201ENSMUST00000103937 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm13015-201ENSMUST00000118674 204 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm25349-201ENSMUST00000177728 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm23616-201ENSMUST00000177797 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm25871-201ENSMUST00000177816 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm24752-201ENSMUST00000178240 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm24496-201ENSMUST00000178287 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm25649-201ENSMUST00000178476 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm25548-201ENSMUST00000178681 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm23147-201ENSMUST00000178841 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm26095-201ENSMUST00000179270 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm22171-201ENSMUST00000179283 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm23936-201ENSMUST00000179354 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm22619-201ENSMUST00000179516 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm25255-201ENSMUST00000179579 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm24755-201ENSMUST00000179691 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm26506-201ENSMUST00000179692 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm25086-201ENSMUST00000179931 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm23243-201ENSMUST00000180047 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm24659-201ENSMUST00000180212 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm24169-201ENSMUST00000180244 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm23689-201ENSMUST00000180354 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm27359-201ENSMUST00000184153 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm27785-201ENSMUST00000184268 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm27466-201ENSMUST00000184396 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm27703-201ENSMUST00000184836 110 ntBASIC13.13□□□□□ -0.31
Chmp1b1Q99LU0 Gm44872-201ENSMUST00000207864 420 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms