Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Clp1Q99LI9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Gm38144-201ENSMUST00000192790 465 ntBASIC14.57□□□□□ -0.08
Clp1Q99LI9 Gm42627-201ENSMUST00000197347 224 ntBASIC14.57□□□□□ -0.08
Clp1Q99LI9 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.57□□□□□ -0.08
Clp1Q99LI9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.57□□□□□ -0.08
Clp1Q99LI9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Clp1Q99LI9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Gm4857-201ENSMUST00000192718 785 ntBASIC14.56□□□□□ -0.08
Clp1Q99LI9 Gm37497-201ENSMUST00000195830 798 ntBASIC14.56□□□□□ -0.08
Clp1Q99LI9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.56□□□□□ -0.08
Clp1Q99LI9 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.56□□□□□ -0.08
Clp1Q99LI9 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.56□□□□□ -0.08
Clp1Q99LI9 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.56□□□□□ -0.08
Clp1Q99LI9 Gm26315-201ENSMUST00000083890 321 ntBASIC14.56□□□□□ -0.08
Clp1Q99LI9 Gm10268-201ENSMUST00000085340 555 ntBASIC14.56□□□□□ -0.08
Clp1Q99LI9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Clp1Q99LI9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Gm11793-201ENSMUST00000120433 981 ntBASIC14.55□□□□□ -0.08
Clp1Q99LI9 Gm13342-201ENSMUST00000121055 207 ntBASIC14.55□□□□□ -0.08
Clp1Q99LI9 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Gm18827-201ENSMUST00000188341 790 ntBASIC14.55□□□□□ -0.08
Clp1Q99LI9 Gm29608-201ENSMUST00000190444 463 ntBASIC14.55□□□□□ -0.08
Clp1Q99LI9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Gm43133-201ENSMUST00000197472 463 ntBASIC14.55□□□□□ -0.08
Clp1Q99LI9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.55□□□□□ -0.08
Clp1Q99LI9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Clp1Q99LI9 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.55□□□□□ -0.08
Clp1Q99LI9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Clp1Q99LI9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms