Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.04■□□□□ 0.32
RtcbQ99LF4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC17.04■□□□□ 0.32
RtcbQ99LF4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RtcbQ99LF4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Gm9176-201ENSMUST00000219955 1120 ntBASIC17.03■□□□□ 0.32
RtcbQ99LF4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Gm10146-201ENSMUST00000072739 309 ntBASIC17.03■□□□□ 0.32
RtcbQ99LF4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Gm3695-201ENSMUST00000087222 1009 ntBASIC17.03■□□□□ 0.32
RtcbQ99LF4 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RtcbQ99LF4 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.02■□□□□ 0.32
RtcbQ99LF4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.02■□□□□ 0.32
RtcbQ99LF4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Gm38000-201ENSMUST00000192390 1215 ntBASIC17.02■□□□□ 0.32
RtcbQ99LF4 Gm37259-201ENSMUST00000193903 849 ntBASIC17.02■□□□□ 0.32
RtcbQ99LF4 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.02■□□□□ 0.32
RtcbQ99LF4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.02■□□□□ 0.32
RtcbQ99LF4 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RtcbQ99LF4 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RtcbQ99LF4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
RtcbQ99LF4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RtcbQ99LF4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
RtcbQ99LF4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RtcbQ99LF4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
RtcbQ99LF4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RtcbQ99LF4 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RtcbQ99LF4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Gm6203-201ENSMUST00000209575 1342 ntBASIC17.01■□□□□ 0.31
RtcbQ99LF4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.01■□□□□ 0.31
RtcbQ99LF4 Gm10608-202ENSMUST00000213924 676 ntBASIC17.01■□□□□ 0.31
RtcbQ99LF4 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.01■□□□□ 0.31
RtcbQ99LF4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RtcbQ99LF4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms