Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cstf1Q99LC2 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Gm13612-201ENSMUST00000119276 390 ntBASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Gm15376-201ENSMUST00000122258 783 ntBASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Gm6983-201ENSMUST00000214912 628 ntBASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cstf1Q99LC2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Gm22331-201ENSMUST00000158066 136 ntBASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Gm24196-201ENSMUST00000179161 110 ntBASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Gm37714-201ENSMUST00000194742 342 ntBASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Gm3961-201ENSMUST00000204425 994 ntBASIC13.84□□□□□ -0.19
Cstf1Q99LC2 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cstf1Q99LC2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.83□□□□□ -0.19
Cstf1Q99LC2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cstf1Q99LC2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cstf1Q99LC2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gm15371-201ENSMUST00000117057 784 ntBASIC13.83□□□□□ -0.2
Cstf1Q99LC2 Gm15236-201ENSMUST00000117309 379 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms