Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.67□□□□□ -0.38
Lims1Q99JW4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Gm25911-201ENSMUST00000157621 56 ntBASIC12.66□□□□□ -0.38
Lims1Q99JW4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.66□□□□□ -0.38
Lims1Q99JW4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.66□□□□□ -0.38
Lims1Q99JW4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.66□□□□□ -0.38
Lims1Q99JW4 Mir125a-201ENSMUST00000083545 68 ntBASIC12.66□□□□□ -0.38
Lims1Q99JW4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.66□□□□□ -0.38
Lims1Q99JW4 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Lims1Q99JW4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.65□□□□□ -0.38
Lims1Q99JW4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.65□□□□□ -0.38
Lims1Q99JW4 Gm15920-201ENSMUST00000118998 402 ntBASIC12.65□□□□□ -0.38
Lims1Q99JW4 Gm18889-201ENSMUST00000174284 929 ntBASIC12.65□□□□□ -0.38
Lims1Q99JW4 Gm27494-201ENSMUST00000184735 189 ntBASIC12.65□□□□□ -0.38
Lims1Q99JW4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lims1Q99JW4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Lims1Q99JW4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.64□□□□□ -0.39
Lims1Q99JW4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.64□□□□□ -0.39
Lims1Q99JW4 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.64□□□□□ -0.39
Lims1Q99JW4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.64□□□□□ -0.39
Lims1Q99JW4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Gm18049-201ENSMUST00000208909 581 ntBASIC12.64□□□□□ -0.39
Lims1Q99JW4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lims1Q99JW4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms