Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm44746-201ENSMUST00000205565 1349 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm12882-201ENSMUST00000121696 517 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm28011-201ENSMUST00000184097 175 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm6590-201ENSMUST00000203343 687 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm45401-201ENSMUST00000209456 733 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm9063-201ENSMUST00000223299 582 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 AC121567.1-201ENSMUST00000227213 842 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 BC001981-202ENSMUST00000191393 1545 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm42449-201ENSMUST00000200349 2258 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Gm42975-201ENSMUST00000200612 1491 ntBASIC13.74□□□□□ -0.21
Pcdhb20Q91XZ9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gm44332-201ENSMUST00000203712 433 ntBASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 AC159886.1-201ENSMUST00000217099 1091 ntBASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gm46209-201ENSMUST00000217912 553 ntBASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhb20Q91XZ9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Mir669l-201ENSMUST00000103771 98 ntBASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm12151-201ENSMUST00000121374 290 ntBASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm27321-201ENSMUST00000185021 205 ntBASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Gm42782-201ENSMUST00000197286 522 ntBASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 AC161250.1-201ENSMUST00000213426 1111 ntBASIC13.72□□□□□ -0.21
Pcdhb20Q91XZ9 AC069561.1-201ENSMUST00000213750 424 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms