Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Usp3Q91W36 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp3Q91W36 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp3Q91W36 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp3Q91W36 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp3Q91W36 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Usp3Q91W36 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp3Q91W36 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp3Q91W36 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp3Q91W36 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp3Q91W36 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.28□□□□□ -0.12
Usp3Q91W36 Gm37917-201ENSMUST00000194711 392 ntBASIC14.28□□□□□ -0.12
Usp3Q91W36 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.28□□□□□ -0.12
Usp3Q91W36 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.28□□□□□ -0.12
Usp3Q91W36 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp3Q91W36 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.28□□□□□ -0.12
Usp3Q91W36 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp3Q91W36 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp3Q91W36 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp3Q91W36 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Usp3Q91W36 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.27□□□□□ -0.12
Usp3Q91W36 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.27□□□□□ -0.12
Usp3Q91W36 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp3Q91W36 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Usp3Q91W36 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Usp3Q91W36 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp3Q91W36 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp3Q91W36 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp3Q91W36 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp3Q91W36 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp3Q91W36 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp3Q91W36 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Usp3Q91W36 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp3Q91W36 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp3Q91W36 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.27□□□□□ -0.13
Usp3Q91W36 Gm18624-201ENSMUST00000220966 658 ntBASIC14.27□□□□□ -0.13
Usp3Q91W36 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.27□□□□□ -0.13
Usp3Q91W36 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp3Q91W36 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp3Q91W36 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp3Q91W36 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp3Q91W36 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp3Q91W36 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp3Q91W36 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp3Q91W36 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.26□□□□□ -0.13
Usp3Q91W36 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Usp3Q91W36 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Usp3Q91W36 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms