Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H1fooQ8VIK3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
H1fooQ8VIK3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
H1fooQ8VIK3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
H1fooQ8VIK3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
H1fooQ8VIK3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
H1fooQ8VIK3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Gm5779-201ENSMUST00000218467 910 ntBASIC11.64□□□□□ -0.55
H1fooQ8VIK3 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
H1fooQ8VIK3 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Gm8410-201ENSMUST00000117225 605 ntBASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Gm5312-201ENSMUST00000203728 547 ntBASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Gm18027-201ENSMUST00000218947 619 ntBASIC11.63□□□□□ -0.55
H1fooQ8VIK3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Dupd1-202ENSMUST00000224735 548 ntBASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
H1fooQ8VIK3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms