Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4aQ8VEJ9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4aQ8VEJ9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4aQ8VEJ9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Vps4aQ8VEJ9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Vps4aQ8VEJ9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Vps4aQ8VEJ9 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Vps4aQ8VEJ9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4aQ8VEJ9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Vps4aQ8VEJ9 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4aQ8VEJ9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4aQ8VEJ9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4aQ8VEJ9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.52□□□□□ -0.24
Vps4aQ8VEJ9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4aQ8VEJ9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4aQ8VEJ9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4aQ8VEJ9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Vps4aQ8VEJ9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Gm27618-201ENSMUST00000183671 60 ntBASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.52□□□□□ -0.25
Vps4aQ8VEJ9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Gm15693-201ENSMUST00000120470 637 ntBASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Gm10275-202ENSMUST00000168697 495 ntBASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Gm27920-201ENSMUST00000183953 96 ntBASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Gm10275-201ENSMUST00000092620 635 ntBASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Vps4aQ8VEJ9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.5□□□□□ -0.25
Vps4aQ8VEJ9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms