Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Gm8927-201ENSMUST00000181978 981 ntBASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Gm3222-201ENSMUST00000071282 990 ntBASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Atp2a1Q8R429 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Gm11524-201ENSMUST00000119349 807 ntBASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Gm43094-201ENSMUST00000196549 921 ntBASIC15.48■□□□□ 0.07
Atp2a1Q8R429 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Atp2a1Q8R429 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Atp2a1Q8R429 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms