Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc58Q8R3Q6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Gm13036-201ENSMUST00000117799 748 ntBASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Gm27300-201ENSMUST00000184085 97 ntBASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Gm27335-201ENSMUST00000184758 97 ntBASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Gm10060-201ENSMUST00000212002 111 ntBASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Ccdc58Q8R3Q6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc58Q8R3Q6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc58Q8R3Q6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms