Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Sf3a1Q8K4Z5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
Sf3a1Q8K4Z5 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Gm21854-201ENSMUST00000179901 471 ntBASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sf3a1Q8K4Z5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sf3a1Q8K4Z5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Gm16215-201ENSMUST00000161990 637 ntBASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Gm8927-201ENSMUST00000181978 981 ntBASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Gm5425-201ENSMUST00000214125 459 ntBASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sf3a1Q8K4Z5 Gm3222-201ENSMUST00000071282 990 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms