Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Gm4857-201ENSMUST00000192718 785 ntBASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Gm29705-201ENSMUST00000212598 474 ntBASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shtn1Q8K2Q9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Gm24420-201ENSMUST00000176676 59 ntBASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Gm38223-201ENSMUST00000194484 695 ntBASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.3■□□□□ 0.2
Shtn1Q8K2Q9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Gm27682-201ENSMUST00000183930 110 ntBASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Gm10339-203ENSMUST00000225409 1671 ntBASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Shtn1Q8K2Q9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Shtn1Q8K2Q9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms