Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cchcr1Q8K2I2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cchcr1Q8K2I2 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Gm2756-201ENSMUST00000195851 400 ntBASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Acot6-202ENSMUST00000222921 3622 ntBASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cchcr1Q8K2I2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Gm24543-201ENSMUST00000103867 82 ntBASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Gm11594-201ENSMUST00000122313 162 ntBASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Gm6916-202ENSMUST00000205523 195 ntBASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cchcr1Q8K2I2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.41■□□□□ 0.22
Cchcr1Q8K2I2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms