Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.2□□□□□ -0.14
CopaQ8CIE6 Gm7488-201ENSMUST00000117148 684 ntBASIC14.2□□□□□ -0.14
CopaQ8CIE6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.2□□□□□ -0.14
CopaQ8CIE6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.2□□□□□ -0.14
CopaQ8CIE6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.2□□□□□ -0.14
CopaQ8CIE6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.2□□□□□ -0.14
CopaQ8CIE6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CopaQ8CIE6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CopaQ8CIE6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Gm44855-201ENSMUST00000205725 362 ntBASIC14.2□□□□□ -0.14
CopaQ8CIE6 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Gm46209-201ENSMUST00000217912 553 ntBASIC14.2□□□□□ -0.14
CopaQ8CIE6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CopaQ8CIE6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CopaQ8CIE6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.19□□□□□ -0.14
CopaQ8CIE6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Gm15653-201ENSMUST00000119247 907 ntBASIC14.19□□□□□ -0.14
CopaQ8CIE6 Gm15321-201ENSMUST00000121290 288 ntBASIC14.19□□□□□ -0.14
CopaQ8CIE6 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Gm43703-201ENSMUST00000200523 763 ntBASIC14.19□□□□□ -0.14
CopaQ8CIE6 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.19□□□□□ -0.14
CopaQ8CIE6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CopaQ8CIE6 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Syt7-205ENSMUST00000224135 1557 ntBASIC14.18□□□□□ -0.14
CopaQ8CIE6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.18□□□□□ -0.14
CopaQ8CIE6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Gm45453-201ENSMUST00000211758 853 ntBASIC14.18□□□□□ -0.14
CopaQ8CIE6 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CopaQ8CIE6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.18□□□□□ -0.14
CopaQ8CIE6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CopaQ8CIE6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.17□□□□□ -0.14
CopaQ8CIE6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CopaQ8CIE6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms