Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Clip4Q8CI96 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.01□□□□□ -0.17
Clip4Q8CI96 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.01□□□□□ -0.17
Clip4Q8CI96 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Gm25144-201ENSMUST00000179561 110 ntBASIC14.01□□□□□ -0.17
Clip4Q8CI96 Gm25352-201ENSMUST00000179815 110 ntBASIC14.01□□□□□ -0.17
Clip4Q8CI96 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip4Q8CI96 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Clip4Q8CI96 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14□□□□□ -0.17
Clip4Q8CI96 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14□□□□□ -0.17
Clip4Q8CI96 Gm5566-201ENSMUST00000116118 459 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clip4Q8CI96 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Mir7023-201ENSMUST00000185093 64 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm29310-201ENSMUST00000185468 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21825-201ENSMUST00000185728 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm29109-201ENSMUST00000185895 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21896-201ENSMUST00000186520 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21873-201ENSMUST00000186728 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21794-201ENSMUST00000187056 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21880-201ENSMUST00000187275 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21826-201ENSMUST00000187451 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21198-201ENSMUST00000188393 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21749-201ENSMUST00000189343 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21901-201ENSMUST00000189568 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm29424-201ENSMUST00000189716 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm28599-201ENSMUST00000189838 694 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21867-201ENSMUST00000189917 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm29269-201ENSMUST00000190087 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21722-201ENSMUST00000190153 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm28423-201ENSMUST00000190701 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21899-201ENSMUST00000190745 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21910-201ENSMUST00000191163 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21849-201ENSMUST00000191571 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm28678-201ENSMUST00000191593 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Gm38294-201ENSMUST00000192831 381 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Gm20910-201ENSMUST00000193268 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Gm21871-201ENSMUST00000194621 696 ntBASIC14□□□□□ -0.17
Clip4Q8CI96 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clip4Q8CI96 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip4Q8CI96 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms