Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Shd-206ENSMUST00000225145 998 ntBASIC16.4■□□□□ 0.22
Nup88Q8CEC0 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nup88Q8CEC0 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nup88Q8CEC0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Gm11424-201ENSMUST00000121929 829 ntBASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nup88Q8CEC0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Gm16215-201ENSMUST00000161990 637 ntBASIC16.37■□□□□ 0.21
Nup88Q8CEC0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nup88Q8CEC0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm15321-201ENSMUST00000121290 288 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm24694-201ENSMUST00000180054 110 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm27663-201ENSMUST00000184839 110 ntBASIC16.36■□□□□ 0.21
Nup88Q8CEC0 Gm29310-201ENSMUST00000185468 696 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms