Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Gm14723-201ENSMUST00000118686 215 ntBASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Gm24644-201ENSMUST00000157114 139 ntBASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Gm27514-201ENSMUST00000183692 110 ntBASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Gm45880-201ENSMUST00000213041 853 ntBASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.06■□□□□ 0.32
Ptcd1Q8C2E4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Gm13689-201ENSMUST00000119360 685 ntBASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Gm15376-201ENSMUST00000122258 783 ntBASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Gm24196-201ENSMUST00000179161 110 ntBASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ptcd1Q8C2E4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Gm43205-201ENSMUST00000198622 1968 ntBASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Gm37714-201ENSMUST00000194742 342 ntBASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ptcd1Q8C2E4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Gm13612-201ENSMUST00000119276 390 ntBASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Gm38241-201ENSMUST00000192641 898 ntBASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ptcd1Q8C2E4 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms