Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cps1Q8C196 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cps1Q8C196 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cps1Q8C196 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Cps1Q8C196 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC18.31■□□□□ 0.52
Cps1Q8C196 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cps1Q8C196 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC18.31■□□□□ 0.52
Cps1Q8C196 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cps1Q8C196 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cps1Q8C196 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Cps1Q8C196 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cps1Q8C196 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cps1Q8C196 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cps1Q8C196 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cps1Q8C196 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Cps1Q8C196 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC18.3■□□□□ 0.52
Cps1Q8C196 Gm22121-201ENSMUST00000175148 54 ntBASIC18.3■□□□□ 0.52
Cps1Q8C196 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 CT030182.1-201ENSMUST00000225935 533 ntBASIC18.3■□□□□ 0.52
Cps1Q8C196 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cps1Q8C196 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cps1Q8C196 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.3■□□□□ 0.52
Cps1Q8C196 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cps1Q8C196 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Gm24830-201ENSMUST00000102024 166 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Gm12012-201ENSMUST00000118857 1066 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cps1Q8C196 Gm25890-201ENSMUST00000177643 165 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Rnu1b2-201ENSMUST00000178073 165 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Rnu1b1-201ENSMUST00000178250 165 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Gm22614-201ENSMUST00000178300 165 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Gm30285-201ENSMUST00000214614 422 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 AC069562.3-201ENSMUST00000225387 587 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cps1Q8C196 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cps1Q8C196 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cps1Q8C196 Gm22042-201ENSMUST00000082989 165 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Gm26232-201ENSMUST00000083360 166 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Gm24136-201ENSMUST00000083374 165 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Rnu1b6-201ENSMUST00000083839 166 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Gm26110-201ENSMUST00000083971 165 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Gm6015-201ENSMUST00000217493 1586 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cps1Q8C196 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC18.29■□□□□ 0.52
Cps1Q8C196 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC18.29■□□□□ 0.52
Cps1Q8C196 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Cps1Q8C196 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Cps1Q8C196 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cps1Q8C196 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC18.28■□□□□ 0.52
Cps1Q8C196 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC18.28■□□□□ 0.52
Cps1Q8C196 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC18.28■□□□□ 0.52
Cps1Q8C196 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC18.28■□□□□ 0.52
Cps1Q8C196 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Cps1Q8C196 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cps1Q8C196 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
Cps1Q8C196 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Gm7899-201ENSMUST00000192935 1897 ntBASIC18.28■□□□□ 0.52
Cps1Q8C196 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cps1Q8C196 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Cps1Q8C196 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cps1Q8C196 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms