Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Gm25144-201ENSMUST00000179561 110 ntBASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Gm25352-201ENSMUST00000179815 110 ntBASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Gm37714-201ENSMUST00000194742 342 ntBASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Gm18027-201ENSMUST00000218947 619 ntBASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sh3rf3Q8C120 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Mir6956-201ENSMUST00000183598 62 ntBASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Gm44344-201ENSMUST00000200287 129 ntBASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sh3rf3Q8C120 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Gm33320-201ENSMUST00000192232 530 ntBASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Gm43703-201ENSMUST00000200523 763 ntBASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.47□□□□□ -0.09
Sh3rf3Q8C120 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sh3rf3Q8C120 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms