Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Gm23547-201ENSMUST00000158210 271 ntBASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 AA543401-201ENSMUST00000164248 1269 ntBASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Gm10576-201ENSMUST00000191927 825 ntBASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trerf1Q8BXJ2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Gm15693-201ENSMUST00000120470 637 ntBASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trerf1Q8BXJ2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Gm29541-201ENSMUST00000191351 678 ntBASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trerf1Q8BXJ2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trerf1Q8BXJ2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms