Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm29310-201ENSMUST00000185468 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21825-201ENSMUST00000185728 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm29109-201ENSMUST00000185895 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21896-201ENSMUST00000186520 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21873-201ENSMUST00000186728 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21794-201ENSMUST00000187056 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21880-201ENSMUST00000187275 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21826-201ENSMUST00000187451 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21198-201ENSMUST00000188393 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21749-201ENSMUST00000189343 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21901-201ENSMUST00000189568 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm29424-201ENSMUST00000189716 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm28599-201ENSMUST00000189838 694 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21867-201ENSMUST00000189917 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm29269-201ENSMUST00000190087 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21722-201ENSMUST00000190153 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm28423-201ENSMUST00000190701 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21899-201ENSMUST00000190745 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21910-201ENSMUST00000191163 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21849-201ENSMUST00000191571 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm28678-201ENSMUST00000191593 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm20910-201ENSMUST00000193268 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm21871-201ENSMUST00000194621 696 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gm44344-201ENSMUST00000200287 129 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ube3dQ8BX13 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.35□□□□□ -0.43
Ube3dQ8BX13 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Gm6222-201ENSMUST00000120787 396 ntBASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Mir7684-201ENSMUST00000183858 60 ntBASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Gm37230-201ENSMUST00000194491 818 ntBASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ube3dQ8BX13 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms