Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.5□□□□□ -0.25
Cpsf4Q8BQZ5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Gm5566-201ENSMUST00000116118 459 ntBASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Gm10275-202ENSMUST00000168697 495 ntBASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Gm10275-201ENSMUST00000092620 635 ntBASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cpsf4Q8BQZ5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Gm9719-201ENSMUST00000162765 543 ntBASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Gm6888-201ENSMUST00000221983 706 ntBASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Matn2-206ENSMUST00000228570 2798 ntBASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cpsf4Q8BQZ5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Gm27533-201ENSMUST00000183800 152 ntBASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.47□□□□□ -0.25
Cpsf4Q8BQZ5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms