Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Gm45167-201ENSMUST00000208007 322 ntBASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smco3Q8BQM7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Gm25990-201ENSMUST00000102440 86 ntBASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Gm15173-201ENSMUST00000122049 433 ntBASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Gm17807-201ENSMUST00000186869 298 ntBASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.43□□□□□ -0.58
Smco3Q8BQM7 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smco3Q8BQM7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.42□□□□□ -0.58
Smco3Q8BQM7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Gm44357-201ENSMUST00000195897 142 ntBASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Gm19658-201ENSMUST00000196231 138 ntBASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Gm44367-201ENSMUST00000196836 138 ntBASIC11.42□□□□□ -0.58
Smco3Q8BQM7 Gm44350-201ENSMUST00000197197 138 ntBASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms