Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Gm19163-201ENSMUST00000223313 780 ntBASIC19.37■□□□□ 0.69
Usp54Q8BL06 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp54Q8BL06 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp54Q8BL06 Gm2606-201ENSMUST00000100754 1002 ntBASIC19.36■□□□□ 0.69
Usp54Q8BL06 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Gm37489-201ENSMUST00000191883 159 ntBASIC19.36■□□□□ 0.69
Usp54Q8BL06 Gm7293-201ENSMUST00000216682 1007 ntBASIC19.36■□□□□ 0.69
Usp54Q8BL06 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Gm12134-201ENSMUST00000122109 520 ntBASIC19.36■□□□□ 0.69
Usp54Q8BL06 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp54Q8BL06 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC19.35■□□□□ 0.69
Usp54Q8BL06 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Usp54Q8BL06 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp54Q8BL06 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC19.35■□□□□ 0.69
Usp54Q8BL06 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Morn2-202ENSMUST00000227729 656 ntBASIC19.35■□□□□ 0.69
Usp54Q8BL06 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp54Q8BL06 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Gm26185-201ENSMUST00000157692 266 ntBASIC19.34■□□□□ 0.69
Usp54Q8BL06 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Gm4768-201ENSMUST00000206199 686 ntBASIC19.34■□□□□ 0.69
Usp54Q8BL06 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Gm12620-201ENSMUST00000119791 1986 ntBASIC19.34■□□□□ 0.69
Usp54Q8BL06 Gm12612-201ENSMUST00000140182 1986 ntBASIC19.34■□□□□ 0.69
Usp54Q8BL06 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp54Q8BL06 Gm37297-201ENSMUST00000192974 2384 ntBASIC19.33■□□□□ 0.69
Usp54Q8BL06 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Usp54Q8BL06 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC19.33■□□□□ 0.69
Usp54Q8BL06 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Usp54Q8BL06 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms