Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Gm45612-201ENSMUST00000211320 160 ntBASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cdhr3Q8BL00 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Gm6222-201ENSMUST00000120787 396 ntBASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 AA543401-201ENSMUST00000164248 1269 ntBASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Gm27741-201ENSMUST00000185060 237 ntBASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 AA619741-201ENSMUST00000195095 646 ntBASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdhr3Q8BL00 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdhr3Q8BL00 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms