Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Gm5354-201ENSMUST00000182417 973 ntBASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Atg4dQ8BGV9 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Atg4dQ8BGV9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Gm12859-201ENSMUST00000117834 427 ntBASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Gm28631-201ENSMUST00000190740 334 ntBASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Atg4dQ8BGV9 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms