Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim50Q810I2 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim50Q810I2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.54□□□□□ -0.24
Trim50Q810I2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.54□□□□□ -0.24
Trim50Q810I2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim50Q810I2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim50Q810I2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.53□□□□□ -0.24
Trim50Q810I2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Gm3436-201ENSMUST00000179930 840 ntBASIC13.53□□□□□ -0.24
Trim50Q810I2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Gm7775-201ENSMUST00000218871 853 ntBASIC13.53□□□□□ -0.24
Trim50Q810I2 Gm9063-201ENSMUST00000223299 582 ntBASIC13.53□□□□□ -0.24
Trim50Q810I2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim50Q810I2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim50Q810I2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim50Q810I2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.52□□□□□ -0.24
Trim50Q810I2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Trim50Q810I2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim50Q810I2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim50Q810I2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.52□□□□□ -0.24
Trim50Q810I2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim50Q810I2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim50Q810I2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim50Q810I2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim50Q810I2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.52□□□□□ -0.25
Trim50Q810I2 Auts2-212ENSMUST00000178555 309 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms