Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Gm12928-201ENSMUST00000117115 573 ntBASIC13.34□□□□□ -0.27
Otop1Q80VM9 Gm15957-201ENSMUST00000118893 974 ntBASIC13.34□□□□□ -0.27
Otop1Q80VM9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.34□□□□□ -0.27
Otop1Q80VM9 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.34□□□□□ -0.27
Otop1Q80VM9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Gm9257-201ENSMUST00000221254 232 ntBASIC13.34□□□□□ -0.27
Otop1Q80VM9 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Gm6091-201ENSMUST00000098307 165 ntBASIC13.34□□□□□ -0.27
Otop1Q80VM9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Otop1Q80VM9 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.34□□□□□ -0.27
Otop1Q80VM9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Otop1Q80VM9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Otop1Q80VM9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Gm43179-201ENSMUST00000198797 275 ntBASIC13.33□□□□□ -0.28
Otop1Q80VM9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.33□□□□□ -0.28
Otop1Q80VM9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Otop1Q80VM9 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Gm29649-201ENSMUST00000185649 419 ntBASIC13.32□□□□□ -0.28
Otop1Q80VM9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.32□□□□□ -0.28
Otop1Q80VM9 Gm18905-201ENSMUST00000205454 928 ntBASIC13.32□□□□□ -0.28
Otop1Q80VM9 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms