Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.36□□□□□ -0.11
Trim62Q80V85 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Gm5354-201ENSMUST00000182417 973 ntBASIC14.36□□□□□ -0.11
Trim62Q80V85 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Gm5279-201ENSMUST00000199575 745 ntBASIC14.36□□□□□ -0.11
Trim62Q80V85 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim62Q80V85 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim62Q80V85 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim62Q80V85 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim62Q80V85 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.35□□□□□ -0.11
Trim62Q80V85 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Trim62Q80V85 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim62Q80V85 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.35□□□□□ -0.11
Trim62Q80V85 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trim62Q80V85 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.35□□□□□ -0.11
Trim62Q80V85 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim62Q80V85 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim62Q80V85 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim62Q80V85 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Trim62Q80V85 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.34□□□□□ -0.11
Trim62Q80V85 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim62Q80V85 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trim62Q80V85 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Trim62Q80V85 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim62Q80V85 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim62Q80V85 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim62Q80V85 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim62Q80V85 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.34□□□□□ -0.11
Trim62Q80V85 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim62Q80V85 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim62Q80V85 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim62Q80V85 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trim62Q80V85 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms