Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm18307-201ENSMUST00000206864 949 ntBASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdh19Q80TF3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdh19Q80TF3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdh19Q80TF3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh19Q80TF3 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms