Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ush1gQ80T11 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Ush1gQ80T11 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.18■□□□□ 0.02
Ush1gQ80T11 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.18■□□□□ 0.02
Ush1gQ80T11 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Ush1gQ80T11 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ush1gQ80T11 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ush1gQ80T11 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.17■□□□□ 0.02
Ush1gQ80T11 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.17■□□□□ 0.02
Ush1gQ80T11 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ush1gQ80T11 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.17■□□□□ 0.02
Ush1gQ80T11 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 AC125117.1-201ENSMUST00000228121 468 ntBASIC15.17■□□□□ 0.02
Ush1gQ80T11 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ush1gQ80T11 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.16■□□□□ 0.02
Ush1gQ80T11 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Gm12957-201ENSMUST00000117835 377 ntBASIC15.16■□□□□ 0.02
Ush1gQ80T11 Gm12390-201ENSMUST00000117897 397 ntBASIC15.16■□□□□ 0.02
Ush1gQ80T11 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.16■□□□□ 0.02
Ush1gQ80T11 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ush1gQ80T11 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Gm8584-201ENSMUST00000171982 758 ntBASIC15.15■□□□□ 0.02
Ush1gQ80T11 Gm37714-201ENSMUST00000194742 342 ntBASIC15.15■□□□□ 0.02
Ush1gQ80T11 Gm18027-201ENSMUST00000218947 619 ntBASIC15.15■□□□□ 0.02
Ush1gQ80T11 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.15■□□□□ 0.02
Ush1gQ80T11 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ush1gQ80T11 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms