Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Gm44364-201ENSMUST00000198368 141 ntBASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Olfr284-202ENSMUST00000206647 966 ntBASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Gm18935-201ENSMUST00000212692 664 ntBASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.71■□□□□ 0.11
Ddx55Q6ZPL9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx55Q6ZPL9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ddx55Q6ZPL9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC15.7■□□□□ 0.1
Ddx55Q6ZPL9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Gm38341-201ENSMUST00000195357 515 ntBASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ddx55Q6ZPL9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Gm9368-201ENSMUST00000219348 831 ntBASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Gm10146-201ENSMUST00000072739 309 ntBASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ddx55Q6ZPL9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms