Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Gm15957-201ENSMUST00000118893 974 ntBASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Gm18057-201ENSMUST00000208220 503 ntBASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smarcd3Q6P9Z1 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Gm11779-201ENSMUST00000118541 368 ntBASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Gm8000-201ENSMUST00000188378 592 ntBASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Gm38225-201ENSMUST00000194001 393 ntBASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smarcd3Q6P9Z1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Gm15467-201ENSMUST00000120582 445 ntBASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.72□□□□□ -0.37
Smarcd3Q6P9Z1 Gm45612-201ENSMUST00000211320 160 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms