Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sp140Q6NSQ5 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Gm29741-201ENSMUST00000192667 421 ntBASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sp140Q6NSQ5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Mir497b-201ENSMUST00000093601 125 ntBASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sp140Q6NSQ5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sp140Q6NSQ5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sp140Q6NSQ5 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sp140Q6NSQ5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Sp140Q6NSQ5 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sp140Q6NSQ5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sp140Q6NSQ5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.08□□□□□ -0.15
Sp140Q6NSQ5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sp140Q6NSQ5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.08□□□□□ -0.16
Sp140Q6NSQ5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms