Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim27Q62158 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.04■□□□□ 0.32
Trim27Q62158 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.04■□□□□ 0.32
Trim27Q62158 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim27Q62158 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.04■□□□□ 0.32
Trim27Q62158 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim27Q62158 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim27Q62158 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.03■□□□□ 0.32
Trim27Q62158 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim27Q62158 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.03■□□□□ 0.32
Trim27Q62158 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC17.03■□□□□ 0.32
Trim27Q62158 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.03■□□□□ 0.32
Trim27Q62158 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.03■□□□□ 0.32
Trim27Q62158 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.03■□□□□ 0.32
Trim27Q62158 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim27Q62158 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim27Q62158 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim27Q62158 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Trim27Q62158 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trim27Q62158 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trim27Q62158 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.02■□□□□ 0.32
Trim27Q62158 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Trim27Q62158 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim27Q62158 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim27Q62158 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim27Q62158 Gm9522-201ENSMUST00000182394 926 ntBASIC17.02■□□□□ 0.32
Trim27Q62158 Gm29667-201ENSMUST00000190817 490 ntBASIC17.02■□□□□ 0.32
Trim27Q62158 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim27Q62158 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC17.02■□□□□ 0.32
Trim27Q62158 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim27Q62158 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Trim27Q62158 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim27Q62158 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.02■□□□□ 0.31
Trim27Q62158 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim27Q62158 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trim27Q62158 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim27Q62158 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim27Q62158 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trim27Q62158 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim27Q62158 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.01■□□□□ 0.31
Trim27Q62158 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim27Q62158 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms