Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ecm1Q61508 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.27■□□□□ 0.04
Ecm1Q61508 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ecm1Q61508 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ecm1Q61508 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.27■□□□□ 0.03
Ecm1Q61508 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ecm1Q61508 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Ecm1Q61508 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ecm1Q61508 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ecm1Q61508 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ecm1Q61508 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ecm1Q61508 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ecm1Q61508 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ecm1Q61508 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.26■□□□□ 0.03
Ecm1Q61508 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.26■□□□□ 0.03
Ecm1Q61508 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Ecm1Q61508 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.26■□□□□ 0.03
Ecm1Q61508 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Gm14723-201ENSMUST00000118686 215 ntBASIC15.26■□□□□ 0.03
Ecm1Q61508 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.26■□□□□ 0.03
Ecm1Q61508 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ecm1Q61508 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ecm1Q61508 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ecm1Q61508 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Mir8109-201ENSMUST00000184375 117 ntBASIC15.26■□□□□ 0.03
Ecm1Q61508 Gm37497-201ENSMUST00000195830 798 ntBASIC15.26■□□□□ 0.03
Ecm1Q61508 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.26■□□□□ 0.03
Ecm1Q61508 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.26■□□□□ 0.03
Ecm1Q61508 AC133598.1-201ENSMUST00000224327 660 ntBASIC15.26■□□□□ 0.03
Ecm1Q61508 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.26■□□□□ 0.03
Ecm1Q61508 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
Ecm1Q61508 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ecm1Q61508 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.26■□□□□ 0.03
Ecm1Q61508 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm13369-201ENSMUST00000119442 987 ntBASIC15.25■□□□□ 0.03
Ecm1Q61508 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm26927-201ENSMUST00000182385 965 ntBASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm37922-201ENSMUST00000195596 455 ntBASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm37008-201ENSMUST00000195712 319 ntBASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm43118-201ENSMUST00000199149 775 ntBASIC15.25■□□□□ 0.03
Ecm1Q61508 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Snora73a-201ENSMUST00000082453 205 ntBASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm10268-201ENSMUST00000085340 555 ntBASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm15544-201ENSMUST00000118776 1531 ntBASIC15.25■□□□□ 0.03
Ecm1Q61508 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Ecm1Q61508 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ecm1Q61508 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ecm1Q61508 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.24■□□□□ 0.03
Ecm1Q61508 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.24■□□□□ 0.03
Ecm1Q61508 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.24■□□□□ 0.03
Ecm1Q61508 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC15.24■□□□□ 0.03
Ecm1Q61508 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ecm1Q61508 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Ecm1Q61508 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ecm1Q61508 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms