Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Mre11Q61216 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Mre11Q61216 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mre11Q61216 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.63■□□□□ 0.25
Mre11Q61216 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Mre11Q61216 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Mre11Q61216 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.63■□□□□ 0.25
Mre11Q61216 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Mre11Q61216 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Mre11Q61216 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.63■□□□□ 0.25
Mre11Q61216 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Mre11Q61216 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mre11Q61216 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
Mre11Q61216 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.62■□□□□ 0.25
Mre11Q61216 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC16.62■□□□□ 0.25
Mre11Q61216 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Mre11Q61216 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.62■□□□□ 0.25
Mre11Q61216 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Mre11Q61216 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.62■□□□□ 0.25
Mre11Q61216 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.62■□□□□ 0.25
Mre11Q61216 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.62■□□□□ 0.25
Mre11Q61216 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC16.62■□□□□ 0.25
Mre11Q61216 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Mre11Q61216 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
Mre11Q61216 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC16.62■□□□□ 0.25
Mre11Q61216 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.62■□□□□ 0.25
Mre11Q61216 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Mre11Q61216 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mre11Q61216 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Gm12106-201ENSMUST00000116006 1200 ntBASIC16.61■□□□□ 0.25
Mre11Q61216 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.61■□□□□ 0.25
Mre11Q61216 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Mre11Q61216 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.61■□□□□ 0.25
Mre11Q61216 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.61■□□□□ 0.25
Mre11Q61216 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.61■□□□□ 0.25
Mre11Q61216 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.61■□□□□ 0.25
Mre11Q61216 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Mre11Q61216 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mre11Q61216 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Mre11Q61216 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mre11Q61216 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms