Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Gm13047-201ENSMUST00000117116 815 ntBASIC13.4□□□□□ -0.26
Col12a1Q60847 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col12a1Q60847 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Col12a1Q60847 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Col12a1Q60847 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.39□□□□□ -0.27
Col12a1Q60847 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.39□□□□□ -0.27
Col12a1Q60847 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC13.39□□□□□ -0.27
Col12a1Q60847 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.39□□□□□ -0.27
Col12a1Q60847 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col12a1Q60847 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.39□□□□□ -0.27
Col12a1Q60847 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.39□□□□□ -0.27
Col12a1Q60847 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.39□□□□□ -0.27
Col12a1Q60847 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col12a1Q60847 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.39□□□□□ -0.27
Col12a1Q60847 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.39□□□□□ -0.27
Col12a1Q60847 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col12a1Q60847 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.39□□□□□ -0.27
Col12a1Q60847 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.39□□□□□ -0.27
Col12a1Q60847 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.39□□□□□ -0.27
Col12a1Q60847 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col12a1Q60847 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.39□□□□□ -0.27
Col12a1Q60847 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.39□□□□□ -0.27
Col12a1Q60847 Gm37042-201ENSMUST00000193816 581 ntBASIC13.39□□□□□ -0.27
Col12a1Q60847 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.39□□□□□ -0.27
Col12a1Q60847 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Col12a1Q60847 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col12a1Q60847 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Col12a1Q60847 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.38□□□□□ -0.27
Col12a1Q60847 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.38□□□□□ -0.27
Col12a1Q60847 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Col12a1Q60847 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Col12a1Q60847 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.38□□□□□ -0.27
Col12a1Q60847 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.38□□□□□ -0.27
Col12a1Q60847 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Col12a1Q60847 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.38□□□□□ -0.27
Col12a1Q60847 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col12a1Q60847 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.38□□□□□ -0.27
Col12a1Q60847 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Col12a1Q60847 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms